What is a repositorium?

The repositorium is a searchable database that provides data on relevant articles from journals, company web pages and web pages of governmental agencies about studies/applications of genome-editing in model plants and agricultural crops in the period January 1996 to May 2018. Search options are article type, technique, plant, traits or free text. The repositorium is based on the systematic map of Dominik Modrzejewski et al., published in the journal environmental evidence. (Download article PDF).

524 Einträge gefunden

ID Reference Title Year plant_species genome_editing_technique
1 Journal Article Trait stacking via targeted genome editing
Ainley, William M.; Sastry-Dent, Lakshmi; Welter, Mary E.; Murray, ...
2013 Zea mays Zinc-finger nucleases Details
2 Journal Article Manipulating the Biosynthesis of Bioactive Compound Alkaloids for Next-Generation Metabolic Engineering in Opium Poppy Using CRISPR-Cas 9 Genome Editing Technology
Alagoz, Yagiz; Gurkok, Tugba; Zhang, Baohong; Unver, Turgay
2016 Papaver somniferum CRISPR/Cas9 Details
3 Journal Article CRISPR/Cas9-mediated viral interference in plants
Ali, Zahir; Abulfaraj, Aala; Idris, Ali; Ali, Shakila; Tashkandi, ...
2015 Nicotiana benthamiana CRISPR/Cas9 Details
4 Journal Article Efficient Virus-Mediated Genome Editing in Plants Using the CRISPR/Cas9 System
Ali, Zahir; Abul-faraj, Aala; Li, Lixin; Ghosh, Neha; Piatek, Marek; ...
2015 Nicotiana benthamiana CRISPR/Cas9 Details
5 Journal Article Activity and specificity of TRV-mediated gene editing in plants
Ali, Zahir; Abul-faraj, Aala; Piatek, Marek; Mahfouz, Magdy M.
2015 Nicotiana benthamiana CRISPR/Cas9 Details
6 Journal Article CRISPR/Cas9-Mediated Immunity to Geminiviruses
Ali, Zahir; Ali, Shakila; Tashkandi, Manal; Zaidi, Syed Shan-E-Ali; ...
2016 Nicotiana benthamiana CRISPR/Cas9 Details
7 Journal Article Efficient targeted multiallelic mutagenesis in tetraploid potato (Solanum tuberosum) by transient CRISPR-Cas9 expression in protoplasts
Andersson, Mariette; Turesson, Helle; Nicolia, Alessandro; Fält, ...
2017 Solanum tuberosum CRISPR/Cas9 Details
8 Journal Article BIBAC-GW-based vectors for generating reporter lines for site-specific genome editing in planta
Anggoro, Damar Tri; Tark-Dame, Mariliis; Walmsley, Aimee; Oka, Rurika; ...
2017 Arabidopsis thaliana Oligonucleotide-directed mutagenesis Details
9 Journal Article Targeted DNA excision in Arabidopsis by a re-engineered homing endonuclease
Antunes, Mauricio S.; Smith, J. Jeff; Jantz, Derek; Medford, June I.
2012 Arabidopsis thaliana Meganucleases Details
10 Journal Article DNA-free two-gene knockout in Chlamydomonas reinhardtii via CRISPR-Cas9 ribonucleoproteins
Baek, Kwangryul; Kim, Duk Hyoung; Jeong, Jooyeon; Sim, Sang Jun; ...
2016 Chlamydomonas reinhardtii CRISPR/Cas9 Details
11 Journal Article DNA Replicons for Plant Genome Engineering
Baltes, Nicholas J.; Gil-Humanes, Javier; Cermak, Tomas; Atkins, Paul ...
2014 Arabidopsis thaliana, Nicotiana benthamiana Zinc-finger nucleases, TALENs, CRISPR/Cas9 Details
12 Journal Article Conferring resistance to geminiviruses with the CRISPR–Cas prokaryotic immune system
Baltes, Nicholas J.; Hummel, Aaron W.; Konecna, Eva; Cegan, Radim; ...
2015 Nicotiana benthamiana CRISPR/Cas9 Details
13 Journal Article CRISPR/Cas9 activity in the rice OsBEIIb gene does not induce off-target effects in the closely related paralog OsBEIIa
Baysal, Can; Bortesi, Luisa; Zhu, Changfu; Farré, Gemma; Schillberg, ...
2016 Oryza sativa CRISPR/Cas9 Details
14 Journal Article Compact designer TALENs for efficient genome engineering
Beurdeley, Marine; Bietz, Fabian; Li, Jin; Thomas, Severine; Stoddard, ...
2013 Nicotiana benthamiana TALENs Details
15 Journal Article Targeted promoter editing for rice resistance to Xanthomonas oryzae pv. oryzae reveals differential activities for SWEET14-inducing TAL effectors
Blanvillain-Baufumé, Servane; Reschke, Maik; Solé, Montserrat; Auguy, ...
2017 Oryza sativa TALENs Details
16 Journal Article Efficient gene editing in tomato in the first generation using the clustered regularly interspaced short palindromic repeats/CRISPR-associated9 system
Brooks, Christopher; Nekrasov, Vladimir; Lippman, Zachary B.; van Eck, ...
2014 Solanum lycopersicum CRISPR/Cas9 Details
17 Book Targeted modification of gene function exploiting homology-directed repair of TALEN-mediated double strand breaks in barley
Budhagatapalli, Nagaveni; Rutten, Twan; Gurushidze, Maia; Kumlehn, ...
2015 Hordeum vulgare TALENs Details
18 Journal Article A simple test for the cleavage activity of customized endonucleases in plants
Budhagatapalli, Nagaveni; Schedel, Sindy; Gurushidze, Maia; Pencs, ...
2016 Hordeum vulgare, Nicotiana benthamiana TALENs, CRISPR/Cas9 Details
19 Journal Article Generation and Inheritance of Targeted Mutations in Potato (Solanum tuberosum L.) Using the CRISPR/Cas System
Butler, Nathaniel M.; Atkins, Paul A.; Voytas, Daniel F.; Douches, ...
2015 Solanum tuberosum CRISPR/Cas9 Details
20 Journal Article Geminivirus-Mediated Genome Editing in Potato (Solanum tuberosum L.) Using Sequence-Specific Nucleases
Butler, Nathaniel M.; Baltes, Nicholas J.; Voytas, Daniel F.; Douches, ...
2016 Solanum tuberosum CRISPR/Cas9, TALENs Details
21 Journal Article Targeted transgene integration in plant cells using designed zinc finger nucleases
Cai, Charles Q.; Doyon, Yannick; Ainley, W. Michael; Miller, Jeffrey ...
2008 Nicotiana benthamiana Zinc-finger nucleases Details
22 Journal Article CRISPR/Cas9-mediated targeted mutagenesis of GmFT2a delays flowering time in soya bean
Cai, Yupeng; Chen, Li; Liu, Xiujie; Guo, Chen; Sun, Shi; Wu, Cunxiang; ...
2017 Glycine Max CRISPR/Cas9 Details
23 Journal Article CRISPR/Cas9-Mediated Genome Editing in Soybean Hairy Roots
Cai, Yupeng; Chen, Li; Liu, Xiujie; Sun, Shi; Wu, Cunxiang; Jiang, ...
2015 Glycine Max CRISPR/Cas9 Details
24 Journal Article Identification of "safe harbor" loci in indica rice genome by harnessing the property of zinc-finger nucleases to induce DNA damage and repair
Cantos, Christian; Francisco, Perigio; Trijatmiko, Kurniawan R.; ...
2014 Oryza sativa Zinc-finger nucleases Details
25 Journal Article Control of inflorescence architecture in tomato by BTB/POZ transcriptional regulators
Cao Xu; Soon Ju Park; Joyce Van Eck; Zachary B. Lippman
2016 Solanum lycopersicum CRISPR/Cas9 Details
26 Journal Article Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting
Cermak, T.; Doyle, E. L.; Christian, M.; Wang, L.; Zhang, Y.; Schmidt, ...
2011 Arabidopsis thaliana TALENs Details
27 Journal Article High-frequency, precise modification of the tomato genome
Čermák, Tomáš; Baltes, Nicholas J.; Čegan, Radim; Zhang, Yong; Voytas, ...
2015 Solanum lycopersicum CRISPR/Cas9, TALENs Details
28 Journal Article Development of broad virus resistance in non-transgenic cucumber using CRISPR/Cas9 technology
Chandrasekaran, Jeyabharathy; Brumin, Marina; Wolf, Dalia; Leibman, ...
2016 Cucumis sativus CRISPR/Cas9 Details
29 Journal Article An Agrobacterium-delivered CRISPR/Cas9 system for high-frequency targeted mutagenesis in maize
Char, Si Nian; Neelakandan, Anjanasree K.; Nahampun, Hartinio; Frame, ...
2017 Zea mays CRISPR/Cas9 Details
30 Journal Article Heritable site-specific mutagenesis using TALENs in maize
Char, Si Nian; Unger-Wallace, Erica; Frame, Bronwyn; Briggs, Sarah A.; ...
2015 Zea mays TALENs Details
31 Journal Article An efficient TALEN mutagenesis system in rice
Chen, Kunling; Shan, Qiwei; Gao, Caixia
2014 Oryza sativa TALENs Details
32 Journal Article Inhibiting replication of begomoviruses using artificial zinc finger nucleases that target viral-conserved nucleotide motif
Chen, Wei; Qian, Yongsheng; Wu, Xiaoyun; Sun, Yuqiang; Wu, Xiaoxia; ...
2014 Nicotiana benthamiana Zinc-finger nucleases Details
33 Journal Article Targeted mutagenesis in cotton (Gossypium hirsutum L.) using the CRISPR/Cas9 system
Chen, Xiugui; Lu, Xuke; Shu, Na; Wang, Shuai; Wang, Junjuan; Wang, ...
2017 Gossypium hirsutum CRISPR/Cas9 Details
34 Journal Article CRISPR/Cas9-mediated base-editing system efficiently generates gain-of-function mutations in Arabidopsis
Chen, Yiyu; Wang, Zhiping; Ni, Hanwen; Xu, Yong; Chen, Qijun; Jiang, ...
2017 Arabidopsis thaliana Base-editing Details
35 Journal Article Targeted mutagenesis of Arabidopsis thaliana using engineered TAL effector nucleases
Christian, Michelle; Qi, Yiping; Zhang, Yong; Voytas, Daniel F.
2013 Arabidopsis thaliana TALENs Details
36 Journal Article Improving cold storage and processing traits in potato through targeted gene knockout
Clasen, Benjamin M.; Stoddard, Thomas J.; Luo, Song; Demorest, Zachary ...
2016 Solanum tuberosum TALENs Details
37 Journal Article CRISPR-Cas9-mediated efficient directed mutagenesis and RAD51-dependent and RAD51-independent gene targeting in the moss Physcomitrella patens
Collonnier, Cécile; Epert, Aline; Mara, Kostlend; Maclot, François; ...
2017 Physcomitrella patens CRISPR/Cas9 Details
38 Journal Article MicroRNA Maturation and MicroRNA Target Gene Expression Regulation Are Severely Disrupted in Soybean dicer-like1 Double Mutants
Curtin, Shaun J.; Michno, Jean-Michel; Campbell, Benjamin W.; ...
2015 Glycine Max Zinc-finger nucleases Details
39 Journal Article Validating Genome-Wide Association Candidates Controlling Quantitative Variation in Nodulation
Curtin, Shaun J.; Tiffin, Peter; Guhlin, Joseph; Trujillo, Diana I.; ...
2017 Medicago truncatula CRISPR/Cas9 Details
40 Journal Article Targeted mutagenesis of duplicated genes in soybean with zinc-finger nucleases
Curtin, Shaun J.; Zhang, Feng; Sander, Jeffry D.; Haun, William J.; ...
2011 Glycine Max Zinc-finger nucleases Details
41 Journal Article Direct stacking of sequence-specific nuclease-induced mutations to produce high oleic and low linolenic soybean oil
Demorest, Zachary L.; Coffman, Andrew; Baltes, Nicholas J.; Stoddard, ...
2016 Glycine Max TALENs Details
42 Journal Article Targeted molecular trait stacking in cotton through targeted double-strand break induction
D’Halluin, Kathleen; Vanderstraeten, Chantal; van Hulle, Jolien; ...
2013 Gossypium hirsutum Meganucleases Details
43 Journal Article Efficient CRISPR/Cas9-mediated Targeted Mutagenesis in Populus in the First Generation
Di Fan; Liu, Tingting; Li, Chaofeng; Jiao, Bo; Li, Shuang; Hou, Yishu; ...
2015 Populus tomentosa Carr. CRISPR/Cas9 Details
44 Journal Article Oligonucleotide-directed gene repair in wheat using a transient plasmid gene repair assay system
Dong, Chongmei; Beetham, Peter; Vincent, Kate; Sharp, Peter
2006 Triticum aestivum Oligonucleotide-directed mutagenesis Details
45 Journal Article Efficient targeted mutagenesis in soybean by TALENs and CRISPR/Cas9
Du, Hongyang; Zeng, Xuanrui; Zhao, Meng; Cui, Xiaopei; Wang, Qing; ...
2016 Glycine Max CRISPR/Cas9, TALENs Details
46 Journal Article Identification of a regulatory element responsible for salt induction of rice OsRAV2 through ex situ and in situ promoter analysis
Duan, Yong-Bo; Li, Juan; Qin, Rui-Ying; Xu, Rong-Fang; Li, Hao; Yang, ...
2016 Oryza sativa CRISPR/Cas9 Details
47 Journal Article High efficiency of targeted mutagenesis in arabidopsis via meiotic promoter-driven expression of Cas9 endonuclease
Eid, Ayman; Ali, Zahir; Mahfouz, Magdy M.
2016 Arabidopsis thaliana CRISPR/Cas9 Details
48 Journal Article Efficient targeted mutagenesis of rice and tobacco genomes using Cpf1 from Francisella novicida
Endo, Akira; Masafumi, Mikami; Kaya, Hidetaka; Toki, Seiichi
2016 Oryza sativa, Nicotiana benthamiana CRISPR/Cpf1 Details
49 Journal Article Biallelic Gene Targeting in Rice
Endo, Masaki; Mikami, Masafumi; Toki, Seiichi
2016 Oryza sativa CRISPR/Cas9 Details
50 Journal Article Multigene knockout utilizing off-target mutations of the CRISPR/Cas9 system in rice
Endo, Masaki; Mikami, Masafumi; Toki, Seiichi
2015 Oryza sativa CRISPR/Cas9 Details