Repositorium

What is a repositorium?

The repositorium is a searchable database that provides data on relevant articles from journals, company web pages and web pages of governmental agencies about studies/applications of genome-editing in model plants and agricultural crops in the period January 1996 to May 2018. Search options are article type, technique, plant, traits or free text. The repositorium is based on the systematic map of Dominik Modrzejewski et al., published in the journal environmental evidence. (Download article PDF).
  • Book
  • Contribution in…
  • Journal Article
  • Thesis
  • Zeitschriftenaufsatz
  • Base-editing
  • CRISPR/Cas9
  • CRISPR/Cpf1
  • Meganucleases
  • Oligonucleotide-directed mutagenesis
  • TALENs
  • Zinc-finger nucleases
  • Actinidia lindl.
  • Arabidopsis thaliana
  • Arachis hypogaea
  • Bambus oldhamii
  • Banana cv. Rasthali
  • Brachypodium
  • Brassica carinata
  • Brassica napus
  • Brassica oleracea
  • Brassica oleracea L. var. Capitata
  • Camelina sativa
  • Carrizo citrange
  • Chlamydomonas reinhardtii
  • Citrullus lanatus (Thunb.) Matsum & Naka,
  • Citrus paradisi
  • Citrus sinensis
  • Closterium peracerosum-strigosum-littorale complex
  • Coprinopsis cinerea
  • Cucumis sativus
  • Daucus carota
  • Ficus carica
  • Flammulina velutipes
  • Fragaria vesca
  • Glycine Max
  • Gossypium barbadense
  • Gossypium hirsutum
  • Hordeum vulgare
  • Lactuca sativa
  • Linum usitatissimum
  • Lotus japonicus
  • Malus
  • Manihot esculenta
  • Marchantia polymorpha
  • Medicago sativa
  • Medicago truncatula
  • Nannochloropsis gaditana
  • Nannochloropsis oceanica
  • Nicotiana alata
  • Nicotiana attenuata
  • Nicotiana benthamiana
  • Nicotiana tabacum
  • Oryza sativa
  • Panicum virgatum
  • Papaver somniferum
  • Parasponia andersonii
  • Phaeodactylum tricornutum
  • Physcomitrella patens
  • Populus tomentosa Carr.
  • Populus trichocarpa
  • Pseudococcomyxa ellipsoidea
  • Saccharum spp.hybrids
  • Salvia miltiorrhiza
  • Scopelophila cataractae
  • Setaria italica
  • Solanum lycopersicum
  • Solanum pimpinellifolium
  • Solanum tuberosum
  • Sorghum bicolor
  • Taraxacum kok-saghyz
  • Theobroma cacao
  • Tobacco
  • Triticum aestivum
  • Triticum durum
  • Triticum turgidum L. var. Durum
  • Vitis vinifera
  • Zea mays
  • Abiotic stress tolerance
  • Agronomic value
  • Agronomic value, biotic stress tolerance
  • Agronomic value, product quality
  • Basic research
  • Biotic stress tolerance
  • Biotic stress tolerance, agronomic value
  • Herbicide tolerance
  • Industrial
  • Product quality
  • Product quality, Agronomic value
  • Product quality, herbicide tolerance
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524 Einträge gefunden

ID Reference Title Year plant_species genome_editing_technique
101 Journal Article A trait stacking system via intra-genomic homologous recombination
Kumar, Sandeep; Worden, Andrew; Novak, Stephen; Lee, Ryan; Petolino, ... 		2016 Zea mays Zinc-finger nucleases Details
102 Journal Article A simple Gateway-assisted construction system of TALEN genes for plant genome editing
Kusano, Hiroaki; Onodera, Hitomi; Kihira, Miho; Aoki, Hiromi; ... 		2016 Solanum tuberosum TALENs Details
103 Journal Article Induction of targeted, heritable mutations in barley and Brassica oleracea using RNA-guided Cas9 nuclease
Lawrenson, Tom; Shorinola, Oluwaseyi; Stacey, Nicola; Li, Chengdao; ... 		2015 Hordeum vulgare, Brassica oleracea CRISPR/Cas9 Details
104 Journal Article Plastidic phosphoglucomutase and ADP-glucose pyrophosphorylase mutants impair starch synthesis in rice pollen grains and cause male sterility
Lee, Sang-Kyu; Eom, Joon-Seob; Hwang, Seon-Kap; Shin, Dongjin; An, ... 		2016 Oryza sativa CRISPR/Cas9 Details
105 Journal Article A high-efficiency CRISPR/Cas9 system for targeted mutagenesis in Cotton (Gossypium hirsutum L.)
Li, Chao; Unver, Turgay; Zhang, Baohong 		2017 Gossypium hirsutum CRISPR/Cas9 Details
106 Journal Article Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9
Li, Jian-Feng; Norville, Julie E.; Aach, John; McCormack, Matthew; ... 		2013 Arabidopsis thaliana, Nicotiana benthamiana CRISPR/Cas9 Details
107 Journal Article Multiplexed, targeted gene editing in Nicotiana benthamiana for glyco-engineering and monoclonal antibody production
Li, Jin; Stoddard, Thomas J.; Demorest, Zachary L.; Lavoie, ... 		2016 Nicotiana benthamiana TALENs Details
108 Journal Article Generation of Targeted Point Mutations in Rice by a Modified CRISPR/Cas9 System
Li, Jingying; Sun, Yongwei; Du, Jinlu; Zhao, Yunde; Xia, Lanqin 		2017 Oryza sativa Base-editing Details
109 Journal Article Gene replacements and insertions in rice by intron targeting using CRISPR-Cas9
Li, Jun; Meng, Xiangbing; Zong, Yuan; Chen, Kunling; Zhang, Huawei; ... 		2016 Oryza sativa CRISPR/Cas9 Details
110 Journal Article Rapid and highly efficient construction of TALE-based transcriptional regulators and nucleases for genome modification
Li, Lixin; Piatek, Marek J.; Atef, Ahmed; Piatek, Agnieszka; Wibowo, ... 		2012 Arabidopsis thaliana TALENs Details
111 Journal Article Reassessment of the Four Yield-related Genes Gn1a, DEP1, GS3, and IPA1 in Rice Using a CRISPR/Cas9 System
Li, Meiru; Li, Xiaoxia; Zhou, Zejiao; Wu, Pingzhi; Fang, Maichun; Pan, ... 		2016 Oryza sativa CRISPR/Cas9 Details
112 Journal Article The Arabidopsis UDP-glycosyltransferases UGT79B2 and UGT79B3, contribute to cold, salt and drought stress tolerance via modulating anthocyanin accumulation
Li, Pan; Li, Yan-Jie; Zhang, Feng-Ju; Zhang, Gui-Zhi; Jiang, Xiao-Yi; ... 		2017 Arabidopsis thaliana CRISPR/Cas9 Details
113 Journal Article Development of japonica Photo-Sensitive Genic Male Sterile Rice Lines by Editing Carbon Starved Anther Using CRISPR/Cas9
Li, Quanlin; Zhang, Dabing; Chen, Mingjiao; Liang, Wanqi; Wei, ... 		2016 Oryza sativa CRISPR/Cas9 Details
114 Journal Article TALEN-Mediated Homologous Recombination Produces Site-Directed DNA Base Change and Herbicide-Resistant Rice
Li, Ting; Liu, Bo; Chen, Chih Ying; Yang, Bing 		2016 Oryza sativa TALENs Details
115 Journal Article High-efficiency TALEN-based gene editing produces disease-resistant rice
Li, Ting; Liu, Bo; Spalding, Martin H.; Weeks, Donald P.; Yang, Bing 		2012 Oryza sativa TALENs Details
116 Journal Article High-efficiency breeding of early-maturing rice cultivars via CRISPR/Cas9-mediated genome editing
Li, Xiufeng; Zhou, Wenjia; Ren, Yuekun; Tian, Xiaojie; Lv, Tianxiao; ... 		2017 Oryza sativa CRISPR/Cas9 Details
117 Journal Article Cas9-Guide RNA Directed Genome Editing in Soybean
Li, Zhongsen; Liu, Zhan-Bin; Xing, Aiqiu; Moon, Bryan P.; Koellhoffer, ... 		2015 Glycine Max CRISPR/Cas9 Details
118 Journal Article Selection of highly efficient sgRNAs for CRISPR/Cas9-based plant genome editing
Liang, Gang; Zhang, Huimin; Lou, Dengji; Yu, Diqiu 		2016 Oryza sativa CRISPR/Cas9 Details
119 Journal Article Efficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes
Liang, Zhen; Chen, Kunling; Li, Tingdong; Zhang, Yi; Wang, Yanpeng; ... 		2017 Triticum aestivum CRISPR/Cas9 Details
120 Journal Article Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas system
Liang, Zhen; Zhang, Kang; Chen, Kunling; Gao, Caixia 		2014 Zea mays CRISPR/Cas9, TALENS Details
121 Journal Article Employing libraries of zinc finger artificial transcription factors to screen for homologous recombination mutants in Arabidopsis
Lindhout, Beatrice I.; Pinas, Johan E.; Hooykaas, Paul J. J.; van der ... 		2006 Arabidopsis thaliana Zinc-finger nucleases Details
122 Journal Article Receptor-Like Kinase RUPO Interacts with Potassium Transporters to Regulate Pollen Tube Growth and Integrity in Rice
Liu, Lingtong; Zheng, Canhui; Kuang, Baijan; Wei, Liqin; Yan, ... 		2016 Oryza sativa CRISPR/Cas9 Details
123 Journal Article A detailed procedure for CRISPR/Cas9-mediated gene editing in Arabidopsis thaliana
Liu, Wenshan; Zhu, Xiaohong; Lei, Mingguang; Xia, Qingyou; Botella, ... 		2015 Arabidopsis thaliana CRISPR/Cas9 Details
124 Journal Article Anther-preferential expressing gene PMR is essential for the mitosis of pollen development in rice
Liu, Yaqin; Xu, Ya; Ling, Sheng; Liu, Shasha; Yao, Jialing 		2017 Oryza sativa CRISPR/Cas9 Details
125 Journal Article SacB-SacR Gene Cassette As the Negative Selection Marker to Suppress Agrobacterium Overgrowth in Agrobacterium-Mediated Plant Transformation
Liu, Yiming; Miao, Jiamin; Traore, Sy; Kong, Danyu; Liu, Yi; Zhang, ... 		2016 Nicotiana benthamiana CRISPR/Cas9 Details
126 Journal Article Targeted mutagenesis using zinc-finger nucleases in Arabidopsis
Lloyd, Alan; Plaisier, Christopher L.; Carroll, Dana; Drews, Gary N. 		2005 Arabidopsis thaliana Zinc-finger nucleases Details
127 Journal Article Simple and Efficient Targeting of Multiple Genes Through CRISPR-Cas9 in Physcomitrella patens
Lopez-Obando, Mauricio; Hoffmann, Beate; Géry, Carine; Guyon-Debast, ... 		2016 Physcomitrella patens CRISPR/Cas9 Details
128 Journal Article Targeted mutagenesis of the tomato PROCERA gene using transcription activator-like effector nucleases
Lor, Vai S.; Starker, Colby G.; Voytas, Daniel F.; Weiss, David; ... 		2014 Solanum lycopersicum TALENs Details
129 Journal Article A CRISPR/Cas9 Toolbox for Multiplexed Plant Genome Editing and Transcriptional Regulation
Lowder, Levi G.; Zhang, Dengwei; Baltes, Nicholas J.; Paul, Joseph W.; ... 		2015 Oryza sativa, Nicotiana benthamiana CRISPR/Cas9 Details
130 Journal Article Rapid Construction of Multiplexed CRISPR-Cas9 Systems for Plant Genome Editing
Lowder, Levi; Malzahn, Aimee; Qi, Yiping 		2017 Arabidopsis thaliana CRISPR/Cas9 Details
131 Journal Article Low frequency of zinc-finger nuclease-induced mutagenesis in Populus
Lu, Haiwei; Klocko, Amy L.; Dow, Michael; Ma, Cathleen; Amarasinghe, ... 		2016 Populus tomentosa Carr. Zinc-finger nucleases Details
132 Journal Article Precise Editing of a Target Base in the Rice Genome Using a Modified CRISPR/Cas9 System
Lu, Yuming; Zhu, Jian-Kang 		2017 Oryza sativa Base-editing Details
133 Journal Article Non-transgenic Plant Genome Editing Using Purified Sequence-Specific Nucleases
Luo, Song; Li, Jin; Stoddard, Thomas J.; Baltes, Nicholas J.; ... 		2015 Nicotiana tabacum TALENs, Meganucleases Details
134 Journal Article TALEN-Based Mutagenesis of Lipoxygenase LOX3 Enhances the Storage Tolerance of Rice (Oryza sativa) Seeds
Ma, Lei; Zhu, Fugui; Li, Zhenwei; Zhang, Jianfu; Li, Xin; Dong, ... 		2015 Oryza sativa TALENs Details
135 Journal Article Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification
Maeder, Morgan L.; Thibodeau-Beganny, Stacey; Osiak, Anna; Wright, ... 		2008 Tobacco Zinc-finger nucleases Details
136 Journal Article De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks
Mahfouz, Magdy M.; Li, Lixin; Shamimuzzaman, Md; Wibowo, Anjar; Fang, ... 		2011 Nicotiana benthamiana TALENs Details
137 Journal Article DNA-Free Genetically Edited Grapevine and Apple Protoplast Using CRISPR/Cas9 Ribonucleoproteins
Malnoy, Mickael; Viola, Roberto; Jung, Min-Hee; Koo, Ok-Jae; Kim, ... 		2016 Malus, Vitis vinifera CRISPR/Cas9 Details
138 Journal Article Application of the CRISPR-Cas system for efficient genome engineering in plants
Mao, Yanfei; Zhang, Hui; Xu, Nanfei; Zhang, Botao; Gou, Feng; Zhu, ... 		2013 Arabidopsis thaliana, Oryza sativa CRISPR/Cas9 Details
139 Journal Article Development of germ-line-specific CRISPR-Cas9 systems to improve the production of heritable gene modifications in Arabidopsis
Mao, Yanfei; Zhang, Zhengjing; Feng, Zhengyan; Wei, Pengliang; Zhang, ... 		2016 Arabidopsis thaliana CRISPR/Cas9 Details
140 Journal Article Nontransgenic genome modification in plant cells
Marton, Ira; Zuker, Amir; Shklarman, Elena; Zeevi, Vardit; Tovkach, ... 		2010 Nicotiana benthamiana Zinc-finger nucleases Details
141 Journal Article Targeted mutagenesis by CRISPR/Cas9 system in the model legume Medicago truncatula
Meng, Yingying; Hou, Yaling; Wang, Hui; Ji, Ronghuan; Liu, Bin; Wen, ... 		2017 Medicago truncatula CRISPR/Cas9 Details
142 Journal Article Gene Inactivation by CRISPR-Cas9 in Nicotiana tabacum BY-2 Suspension Cells
Mercx, Sébastien; Tollet, Jérémie; Magy, Bertrand; Navarre, Catherine; ... 		2016 nicotiana tabacum CRISPR/Cas9 Details
143 Journal Article Targeted mutagenesis in rice using CRISPR-Cas system
Miao, Jin; Guo, Dongshu; Zhang, Jinzhe; Huang, Qingpei; Qin, Genji; ... 		2013 Oryza sativa CRISPR/Cas9 Details
144 Journal Article CRISPR/Cas mutagenesis of soybean and Medicago truncatula using a new web-tool and a modified Cas9 enzyme
Michno, Jean-Michel; Wang, Xiaobo; Liu, Junqi; Curtin, Shaun J.; Kono, ... 		2015 Medicago truncatula, Glycine Max CRISPR/Cas9 Details
145 Journal Article Precision Targeted Mutagenesis via Cas9 Paired Nickases in Rice
Mikami, Masafumi; Toki, Seiichi; Endo, Masaki 		2016 Oryza sativa CRISPR/Cas9 Details
146 Journal Article Parameters affecting frequency of CRISPR/Cas9 mediated targeted mutagenesis in rice
Mikami, Masafumi; Toki, Seiichi; Endo, Masaki 		2015 Oryza sativa CRISPR/Cas9 Details
147 Journal Article Comparison of CRISPR/Cas9 expression constructs for efficient targeted mutagenesis in rice
Mikami, Masafumi; Toki, Seiichi; Endo, Masaki 		2015 Oryza sativa CRISPR/Cas9 Details
148 Journal Article Discovery of rice essential genes by characterizing a CRISPR-edited mutation of closely related rice MAP kinase genes
Minkenberg, Bastian; Xie, Kabin; Yang, Yinong 		2017 Oryza sativa CRISPR/Cas9 Details
149 Journal Article Selective gene dosage by CRISPR-Cas9 genome editing in hexaploid Camelina sativa
Morineau, Céline; Bellec, Yannick; Tellier, Frédérique; Gissot, ... 		2017 Camelina sativa CRISPR/Cas9 Details
150 Journal Article Disruption of Phytoene Desaturase Gene using Transient Expression of Cas9
Mubarik, M. Salman; Khan, Sultan H.; Ahmad, Aftab; Khan, Zulqurnain; ... 		2016 Nicotiana benthamiana CRISPR/Cas9 Details