Repositorium

What is a repositorium?

The repositorium is a searchable database that provides data on relevant articles from journals, company web pages and web pages of governmental agencies about studies/applications of genome-editing in model plants and agricultural crops in the period January 1996 to May 2018. Search options are article type, technique, plant, traits or free text. The repositorium is based on the systematic map of Dominik Modrzejewski et al., published in the journal environmental evidence. (Download article PDF).

Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9


Typ / Jahr

Journal Article / 2013

Autoren

Li, Jian-Feng; Norville, Julie E.; Aach, John; McCormack, Matthew; Zhang, Dandan; Bush, Jenifer; Church, George M.; Sheen, Jen

Abstract

Elucidation and manipulation of human, animal and plant genomes is key to basic biology research, medical advances and crop improvement. The development of targeted genome editing, particularly homologous recombination–based gene replacement, is of great value in all organisms. Recent advances in engineered nucleases with programmable DNA-binding specificities, such as zinc finger nucleases (ZFNs) and transcription activator-like effector nucleases (TALENs), have provided valuable means to create targeted mutations in metazoan and plant genomes with high specificity 1–6 . However, these technologies demand elaborate design and assembly of individual DNA-binding proteins for each DNA target site 1–6 . Recently, a simple, versatile and efficient genome engineering

Keywords
amplicon; Arabidopsis; Arabidopsis Proteins; Arabidopsis thaliana; bacterial growth; Base Sequence; Caspase 9; cell division; cellular apoptosis susceptibility protein DNA binding protein; DNA directed DNA polymerase gamma; double stranded DNA; escherichia coli; gene replacement therapy; genetic engineering; genetic recombination; Genome, Plant; genomic DNA; guide RNA; homologous recombination; human; letter; mutagenesis; Nicotiana benthamiana; onhuman; oxidation; Oxidoreductases; priority journal; procaspase 9; protein expression; Protein Kinases; protein localization; protoplast; RNA; sequence analysis; tobacco; zinc finger nuclease
Periodical
Nature biotechnology
Periodical Number
8
Page range
688–691
Volume
31
DOI
10.1038/nbt.2654

Techniques

ID Corresponding Author
Country
Plant Species GE Technique
Sequence Identifier
Trait
Type of Alteration
Progress in Research
Key Topic
217 Sheen, Jen
USA
Arabidopsis thaliana CRISPR/Cas9
RACK1b/c
No information
SDN1
Basic research
Basic research
218 Sheen, Jen
USA
Arabidopsis thaliana CRISPR/Cas9
AtFLS2
Flagellin sensitive
SDN1
Basic research
Basic research
219 Sheen, Jen
USA
Arabidopsis thaliana CRISPR/Cas9
PDS3
Albino and dwarf phenotype
SDN1
Basic research
Basic research
220 Sheen, Jen
USA
Nicotiana benthamiana CRISPR/Cas9
PDS3
Albino and dwarf phenotype
SDN1
Basic research
Basic research
221 Sheen, Jen
USA
Nicotiana benthamiana CRISPR/Cas9
PDS3
Albino and dwarf phenotype
SDN2
Basic research
Basic research