Repositorium

What is a repositorium?

The repositorium is a searchable database that provides data on relevant articles from journals, company web pages and web pages of governmental agencies about studies/applications of genome-editing in model plants and agricultural crops in the period January 1996 to May 2018. Search options are article type, technique, plant, traits or free text. The repositorium is based on the systematic map of Dominik Modrzejewski et al., published in the journal environmental evidence. (Download article PDF).

Creation of gene-specific rice mutants by AvrXa23-based TALENs


Typ / Jahr

Journal Article / 2017

Autoren

Wang, Fu-Jun; Wang, Chun-Lian; Zheng, Chong-Ke; Qin, Teng-Fei; GAO, Ying; LIU, Pi-qing; Zhao, Kai-Jun

Abstract

Transcription activator-like effector (TALE) nucleases (TALENs) are increasingly used as a powerful tool for genome editing in a variety of organisms. We have previously cloned the TALE-coding gene avrXa23 from Xanthomonas oryzae pv. oryzae and developed an AvrXa23-based assembly system for designer TALEs or TALENs. Here, we exploit TALENs to induce mutagenesis of the rice ethylene response factor (ERF) transcription factor OsERF922 for testing the gene-editing efficiency of AvrXa23-based TALENs system. A pair of TALENs (T-KJ9/KJ10) was assembled and their nuclease activities were first confirmed in rice protoplast transient assay. The TALENs-expressing construct pT-KJ9/KJ10 was then used for rice transformation. We observed targeting somatic mutagenesis frequency of 15.0% in positive transgenic rice calli and obtained two mutant plants with nucleotide deletion or insertion at the designer target region. Our work demonstrates that the AvrXa23-based TALENs system can be used for site-specific genome editing in rice.

Keywords
AvrXa23; genome editing; OsERF922,; rice; TAL effector nucleases; Targeting
Periodical
Journal of Integrative Agriculture
Periodical Number
2
Page range
424–434
Volume
16
DOI
10.1016/S2095-3119(16)61411-9

Techniques

ID Corresponding Author
Country
Plant Species GE Technique
Sequence Identifier
Trait
Type of Alteration
Progress in Research
Key Topic
525 Liu, Pi-qing, Zhao, Kai-jun
China
Oryza sativa TALENs
ERF922
Fungus stress tolerance - tolernt to rice blast
SDN1
Basic research
Basic research