Repositorium

What is a repositorium?

The repositorium is a searchable database that provides data on relevant articles from journals, company web pages and web pages of governmental agencies about studies/applications of genome-editing in model plants and agricultural crops in the period January 1996 to May 2018. Search options are article type, technique, plant, traits or free text. The repositorium is based on the systematic map of Dominik Modrzejewski et al., published in the journal environmental evidence. (Download article PDF).

Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice


Typ / Jahr

Journal Article / 2013

Autoren

Jiang, Wenzhi; Zhou, Huanbin; Bi, Honghao; Fromm, Michael; Yang, Bing; Weeks, Donald P.

Abstract

The type II CRISPR/Cas system from Streptococcus pyogenes and its simplified derivative, the Cas9/single guide RNA (sgRNA) system, have emerged as potent new tools for targeted gene knockout in bacteria, yeast, fruit fly, zebrafish and human cells. Here, we describe adaptations of these systems leading to successful expression of the Cas9/sgRNA system in two dicot plant species, Arabidopsis and tobacco, and two monocot crop species, rice and sorghum. Agrobacterium tumefaciens was used for delivery of genes encoding Cas9, sgRNA and a non-fuctional, mutant green fluorescence protein (GFP) to Arabidopsis and tobacco. The mutant GFP gene contained target sites in its 5' coding regions that were successfully cleaved by a CAS9/sgRNA complex that, along with error-prone DNA repair, resulted in creation of functional GFP genes. DNA sequencing confirmed Cas9/sgRNA-mediated mutagenesis at the target site. Rice protoplast cells transformed with Cas9/sgRNA constructs targeting the promoter region of the bacterial blight susceptibility genes, OsSWEET14 and OsSWEET11, were confirmed by DNA sequencing to contain mutated DNA sequences at the target sites. Successful demonstration of the Cas9/sgRNA system in model plant and crop species bodes well for its near-term use as a facile and powerful means of plant genetic engineering for scientific and agricultural applications.

Keywords
Arabidopsis/genetics; CRISPR-Associated Proteins/genetics/metabolism; Endodeoxyribonucleases/genetics/metabolism; Gene Targeting/methods; Genes, Plant; Genetic Engineering/methods; genome; Green Fluorescent Proteins/genetics; Mutation; Oryza/genetics; Plant Leaves/metabolism; Protoplasts/metabolism; RNA, Guide/metabolism; Seeds/metabolism; Sorghum/embryology/genetics; Tobacco/genetics
Periodical
Nucleic acids research
Periodical Number
20
Page range
Volume
41
DOI
10.1093/nar/gkt780

Techniques

ID Corresponding Author
Country
Plant Species GE Technique
Sequence Identifier
Trait
Type of Alteration
Progress in Research
Key Topic
183 Weeks, Donald P.
USA
Arabidopsis thaliana CRISPR/Cas9
GFP
green fluorescence protein expression
SDN1
Basic research
Basic research
184 Weeks, Donald P.
USA
Sorghum bicolor CRISPR/Cas9
RED2
red fluorescence protein
SDN1
Basic research
Basic research
185 Weeks, Donald P.
USA
Oryza sativa CRISPR/Cas9
SWEET
Resistance to bacterial leaf blight
SDN1
Basic research
Basic research
186 Weeks, Donald P.
USA
Nicotiana benthamiana CRISPR/Cas9
GFP
green fluorescence protein expression
SDN1
Basic research
Basic research